[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 30 items for (author: newton & nd)

EMDB-41265:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (parallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

EMDB-41266:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (antiparallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

PDB-8thi:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (parallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

PDB-8thj:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (antiparallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

EMDB-28531:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 in the 3-RBD Down conformation
Method: single particle / : Williams JA, Harshbarger W

EMDB-28532:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs in the open conformation
Method: single particle / : Williams JA, Harshbarger W

EMDB-28533:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs exposed
Method: single particle / : Williams JA, Harshbarger W

PDB-8epn:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 in the 3-RBD Down conformation
Method: single particle / : Williams JA, Harshbarger W

PDB-8epp:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs in the open conformation
Method: single particle / : Williams JA, Harshbarger W

PDB-8epq:
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs exposed
Method: single particle / : Williams JA, Harshbarger W

EMDB-15775:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in a nanodisc
Method: single particle / : Davies JS, North RA, Dobson RCJ

PDB-8b01:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in a nanodisc
Method: single particle / : Davies JS, North RA, Dobson RCJ

EMDB-13968:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in amphipol
Method: single particle / : North RA, Davies JS, Morado D, Dobson RCJ

PDB-7qha:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in amphipol
Method: single particle / : North RA, Davies JS, Morado D, Dobson RCJ

EMDB-23662:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989
Method: single particle / : Zhou Y, Romero Hernandez A, Saotome K, Franklin MC

PDB-7m42:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989
Method: single particle / : Zhou Y, Romero Hernandez A, Saotome K, Franklin MC

EMDB-23330:
Binjari virus (BinJV) complexed with pr-specific Fab 2A7
Method: single particle / : Coulibaly FJ, Newton ND, Hardy JM, Watterson D

EMDB-23147:
Binjari virus (BinJV)
Method: single particle / : Hardy JM, Venugopal HV, Newton ND, Watterson D, Coulibaly FJ

EMDB-23042:
Chimeric flavivirus between Binjari virus and Dengue virus serotype-2
Method: single particle / : Hardy JM, Venugopal HV, Newton ND, Watterson D, Coulibaly FJ

EMDB-23043:
Chimeric flavivirus between Binjari virus and West Nile (Kunjin) virus
Method: single particle / : Hardy JM, Venugopal HV, Newton ND, Watterson D, Coulibaly FJ

EMDB-23044:
Structure of West Nile virus (Kunjin)
Method: single particle / : Hardy JM, Venugopal HV, Newton ND, Watterson D, Coulibaly FJ

EMDB-23045:
Chimeric flavivirus between Binjari virus and Murray Valley encephalitis virus
Method: single particle / : Hardy JM, Venugopal HV, Newton ND, Watterson D, Coulibaly FJ

EMDB-22738:
CryoEM reconstruction of SARS-CoV-2 receptor binding domain in complex with the Fab fragment of neutralizing antibody 46
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22739:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 80.
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22740:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 298
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22741:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 324
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-20417:
Cryo-EM reconstruction of the mature chimeric BinJV/ZIKV-prME virion
Method: single particle / : Watterson D

EMDB-20438:
Cryo-EM reconstruction of the mature chimeric BinJV/ZIKV-prME virion in complex with Fab C8
Method: single particle / : Watterson D

EMDB-20439:
Cryo-EM reconstruction of the immature chimeric BinJV/ZIKV-prME virion
Method: single particle / : Watterson D

EMDB-5563:
Electron microscopy of Everglades virus
Method: single particle / : Sherman MB, Trujillo J, Leahy I, Razmus D, DeHate R, Lorcheim P, Czarneski MA, Zimmerman D, Newton JPM, Haddow AM, Weaver SC

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more